Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Usp47Q8BY87 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.96
Usp47Q8BY87 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm14755-201ENSMUST00000118037 384 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm13835-201ENSMUST00000118459 685 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm5387-201ENSMUST00000119776 857 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm11787-201ENSMUST00000121996 1050 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm15300-201ENSMUST00000122324 279 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm7266-201ENSMUST00000187999 405 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm8860-201ENSMUST00000193160 445 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm34768-201ENSMUST00000193884 565 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC9.02□□□□□ -0.97
Usp47Q8BY87 AC126685.1-201ENSMUST00000221001 121 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Gm34294-201ENSMUST00000191912 4263 ntBASIC9.02□□□□□ -0.97
Usp47Q8BY87 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp47Q8BY87 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp47Q8BY87 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Gm44045-201ENSMUST00000204906 2520 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 Gm12040-201ENSMUST00000118357 537 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 Gm15332-201ENSMUST00000118386 357 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 Gm12400-201ENSMUST00000120915 1003 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 Gm5809-201ENSMUST00000121854 529 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 Mir1907-201ENSMUST00000122509 90 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Mir5110-201ENSMUST00000175537 87 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC9.01□□□□□ -0.97
Usp47Q8BY87 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Gm44422-201ENSMUST00000204142 1025 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 AC153143.1-201ENSMUST00000222966 1340 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Usp47Q8BY87 CT009480.2-201ENSMUST00000225152 3369 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC9.01□□□□□ -0.97
Usp47Q8BY87 AC165080.3-201ENSMUST00000217162 3116 ntBASIC9.01□□□□□ -0.97
Usp47Q8BY87 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Usp47Q8BY87 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp47Q8BY87 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Usp47Q8BY87 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
Usp47Q8BY87 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp47Q8BY87 Gm22370-201ENSMUST00000102422 83 ntBASIC9□□□□□ -0.97
Usp47Q8BY87 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp47Q8BY87 Gm37265-201ENSMUST00000191698 885 ntBASIC9□□□□□ -0.97
Usp47Q8BY87 Gm37477-201ENSMUST00000195215 884 ntBASIC9□□□□□ -0.97
Usp47Q8BY87 Gm7166-201ENSMUST00000199715 303 ntBASIC9□□□□□ -0.97
Usp47Q8BY87 Gm44809-201ENSMUST00000208305 993 ntBASIC9□□□□□ -0.97
Usp47Q8BY87 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC9□□□□□ -0.97
Usp47Q8BY87 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC9□□□□□ -0.97
Usp47Q8BY87 Gm8256-203ENSMUST00000228692 591 ntBASIC9□□□□□ -0.97
Usp47Q8BY87 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Usp47Q8BY87 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp47Q8BY87 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp47Q8BY87 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC9□□□□□ -0.97
Usp47Q8BY87 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp47Q8BY87 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Usp47Q8BY87 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC9□□□□□ -0.97
Usp47Q8BY87 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp47Q8BY87 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Usp47Q8BY87 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm4853-201ENSMUST00000119359 394 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm12399-201ENSMUST00000121475 446 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm26346-201ENSMUST00000157525 329 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm24343-201ENSMUST00000158708 111 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm6541-201ENSMUST00000165542 561 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp47Q8BY87 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm37758-201ENSMUST00000194275 629 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms