Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm36965-201ENSMUST00000193797 394 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm43157-201ENSMUST00000198223 412 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Snord88a-201ENSMUST00000116723 90 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm14870-201ENSMUST00000118414 156 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm12135-201ENSMUST00000119170 466 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm7599-201ENSMUST00000121453 796 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm36932-201ENSMUST00000195226 929 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm38170-201ENSMUST00000195404 816 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm17918-201ENSMUST00000205315 574 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm45279-201ENSMUST00000210315 391 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm17997-201ENSMUST00000211801 840 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm24405-201ENSMUST00000083033 167 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm24411-201ENSMUST00000083428 131 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.82□□□□□ -1.32
Ccdc40Q8BI79 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm23810-201ENSMUST00000175150 74 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm6489-201ENSMUST00000178167 696 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Mir8105-201ENSMUST00000184718 89 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms