Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm25795-201ENSMUST00000104421 132 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm6382-201ENSMUST00000118873 942 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm24733-201ENSMUST00000158863 253 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm24179-201ENSMUST00000158925 127 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm22548-201ENSMUST00000174899 78 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm7952-201ENSMUST00000180540 984 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm27853-201ENSMUST00000184176 250 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Ighv6-2-201ENSMUST00000192430 295 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm43044-201ENSMUST00000198091 379 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm8667-201ENSMUST00000211112 449 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm45739-201ENSMUST00000213094 388 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 AC154828.2-201ENSMUST00000220908 1070 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.57□□□□□ -1.2
Ddx55Q6ZPL9 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm13114-201ENSMUST00000117605 106 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm5392-201ENSMUST00000122189 789 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm26037-201ENSMUST00000158150 311 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm20778-201ENSMUST00000178524 627 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm5334-201ENSMUST00000187472 720 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm18752-201ENSMUST00000192876 608 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Zfp850-201ENSMUST00000099111 941 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Grik1-209ENSMUST00000227986 2942 ntBASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ddx55Q6ZPL9 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms