Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 AC122357.2-201ENSMUST00000220732 1525 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm17132-201ENSMUST00000109542 1158 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm25848-201ENSMUST00000116790 144 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm11972-201ENSMUST00000118514 389 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm9001-201ENSMUST00000121642 399 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm24190-201ENSMUST00000157976 216 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm26197-201ENSMUST00000175033 115 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm26570-201ENSMUST00000180672 342 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm28113-201ENSMUST00000188280 229 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm7341-201ENSMUST00000192183 926 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm18131-201ENSMUST00000199241 449 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm4860-201ENSMUST00000200368 454 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm2505-201ENSMUST00000200413 825 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm43226-201ENSMUST00000202438 259 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm6581-201ENSMUST00000214545 260 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 AC156795.1-201ENSMUST00000214655 414 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm18619-201ENSMUST00000222722 1147 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 AC116395.1-201ENSMUST00000225480 1143 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm15185-201ENSMUST00000117397 746 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm12740-201ENSMUST00000118794 308 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm15443-201ENSMUST00000118947 820 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm6654-201ENSMUST00000118950 348 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm14837-201ENSMUST00000119688 206 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm15828-201ENSMUST00000119911 522 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm11257-201ENSMUST00000121313 315 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm23426-201ENSMUST00000122483 318 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.86□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms