Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Lim2P56563 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Lim2P56563 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Lim2P56563 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.4□□□□□ -1.39
Lim2P56563 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.4□□□□□ -1.39
Lim2P56563 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.4□□□□□ -1.39
Lim2P56563 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Lim2P56563 Gm43411-201ENSMUST00000196235 1579 ntBASIC6.4□□□□□ -1.39
Lim2P56563 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
Lim2P56563 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Lim2P56563 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Lim2P56563 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Lim2P56563 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.39□□□□□ -1.39
Lim2P56563 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.39□□□□□ -1.39
Lim2P56563 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.39□□□□□ -1.39
Lim2P56563 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Gm12874-201ENSMUST00000117190 913 ntBASIC6.39□□□□□ -1.39
Lim2P56563 Gm12937-201ENSMUST00000118333 448 ntBASIC6.39□□□□□ -1.39
Lim2P56563 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.39□□□□□ -1.39
Lim2P56563 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.39□□□□□ -1.39
Lim2P56563 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.39□□□□□ -1.39
Lim2P56563 Gm16102-201ENSMUST00000160955 420 ntBASIC6.39□□□□□ -1.39
Lim2P56563 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Gm4152-201ENSMUST00000172675 259 ntBASIC6.39□□□□□ -1.39
Lim2P56563 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Gm29650-201ENSMUST00000188485 742 ntBASIC6.39□□□□□ -1.39
Lim2P56563 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Gm37376-201ENSMUST00000192176 453 ntBASIC6.39□□□□□ -1.39
Lim2P56563 Trbv9-201ENSMUST00000194494 290 ntBASIC6.39□□□□□ -1.39
Lim2P56563 Gm44163-201ENSMUST00000205140 475 ntBASIC6.39□□□□□ -1.39
Lim2P56563 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.39□□□□□ -1.39
Lim2P56563 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.39□□□□□ -1.39
Lim2P56563 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Gm18955-201ENSMUST00000223173 649 ntBASIC6.39□□□□□ -1.39
Lim2P56563 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.39□□□□□ -1.39
Lim2P56563 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Lim2P56563 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Lim2P56563 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Lim2P56563 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Lim2P56563 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.39□□□□□ -1.39
Lim2P56563 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.39□□□□□ -1.39
Lim2P56563 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lim2P56563 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.38□□□□□ -1.39
Lim2P56563 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Lim2P56563 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Lim2P56563 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Lim2P56563 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Lim2P56563 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Lim2P56563 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.38□□□□□ -1.39
Lim2P56563 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.38□□□□□ -1.39
Lim2P56563 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Gm22223-201ENSMUST00000157360 125 ntBASIC6.38□□□□□ -1.39
Lim2P56563 Gm26486-201ENSMUST00000158021 110 ntBASIC6.38□□□□□ -1.39
Lim2P56563 Gm26353-201ENSMUST00000158224 255 ntBASIC6.38□□□□□ -1.39
Lim2P56563 Gm25904-201ENSMUST00000158491 143 ntBASIC6.38□□□□□ -1.39
Lim2P56563 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.38□□□□□ -1.39
Lim2P56563 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.38□□□□□ -1.39
Lim2P56563 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Lim2P56563 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.38□□□□□ -1.39
Lim2P56563 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.38□□□□□ -1.39
Lim2P56563 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.38□□□□□ -1.39
Lim2P56563 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.38□□□□□ -1.39
Lim2P56563 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.38□□□□□ -1.39
Lim2P56563 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.38□□□□□ -1.39
Lim2P56563 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.38□□□□□ -1.39
Lim2P56563 Gm7780-201ENSMUST00000214787 406 ntBASIC6.38□□□□□ -1.39
Lim2P56563 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.38□□□□□ -1.39
Lim2P56563 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.38□□□□□ -1.39
Lim2P56563 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.38□□□□□ -1.39
Lim2P56563 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.38□□□□□ -1.39
Lim2P56563 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Lim2P56563 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lim2P56563 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.37□□□□□ -1.39
Lim2P56563 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms