Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Rpl32l-201ENSMUST00000216127 399 ntBASIC8.37□□□□□ -1.07
Rfx1P48377 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Rfx1P48377 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC8.37□□□□□ -1.07
Rfx1P48377 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Rfx1P48377 Desi2-202ENSMUST00000069568 1193 ntBASIC8.37□□□□□ -1.07
Rfx1P48377 Olfr815-201ENSMUST00000071557 951 ntBASIC8.37□□□□□ -1.07
Rfx1P48377 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Mir129-2-201ENSMUST00000083577 90 ntBASIC8.37□□□□□ -1.07
Rfx1P48377 Mir24-2-201ENSMUST00000083607 107 ntBASIC8.37□□□□□ -1.07
Rfx1P48377 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Rfx1P48377 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Rfx1P48377 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.37□□□□□ -1.07
Rfx1P48377 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC8.37□□□□□ -1.07
Rfx1P48377 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rfx1P48377 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Rfx1P48377 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
Rfx1P48377 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.36□□□□□ -1.07
Rfx1P48377 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm13878-201ENSMUST00000117986 577 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm5759-201ENSMUST00000119203 811 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm15390-201ENSMUST00000120323 738 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm3835-201ENSMUST00000120752 403 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm13940-201ENSMUST00000121023 301 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm14156-201ENSMUST00000121538 483 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm23111-201ENSMUST00000122652 105 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm24883-201ENSMUST00000158391 281 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Cfhr3-201ENSMUST00000170441 1022 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm2877-201ENSMUST00000178248 1204 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm21756-201ENSMUST00000178380 930 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm8324-201ENSMUST00000178911 1204 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm21405-201ENSMUST00000179024 930 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm28637-201ENSMUST00000179424 345 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm8304-201ENSMUST00000185744 584 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm21191-201ENSMUST00000186484 930 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm21489-201ENSMUST00000189668 818 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm29503-201ENSMUST00000191044 930 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm19066-201ENSMUST00000193232 1078 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Mir1897-202ENSMUST00000198006 79 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm9710-201ENSMUST00000198053 499 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm18131-201ENSMUST00000199241 449 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm30196-201ENSMUST00000208957 160 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm34424-201ENSMUST00000213400 782 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.36□□□□□ -1.07
Rfx1P48377 AC073562.1-201ENSMUST00000222117 401 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Rfx1P48377 Nsa2-203ENSMUST00000225410 974 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 AC140208.1-201ENSMUST00000226609 285 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Rfx1P48377 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm24917-201ENSMUST00000083935 104 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm22444-201ENSMUST00000093693 108 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 AC158537.1-201ENSMUST00000224637 1711 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Gm33167-201ENSMUST00000201933 2643 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm38081-201ENSMUST00000192680 1645 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Rfx1P48377 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rfx1P48377 Gm38264-201ENSMUST00000194850 2032 ntBASIC8.36□□□□□ -1.07
Rfx1P48377 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.35□□□□□ -1.07
Rfx1P48377 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Gm14356-201ENSMUST00000118322 869 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Gm11485-201ENSMUST00000120048 1175 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms