Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdx2P43241 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.22□□□□□ -1.41
Cdx2P43241 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.22□□□□□ -1.41
Cdx2P43241 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 Mir298-201ENSMUST00000083476 82 ntBASIC6.22□□□□□ -1.41
Cdx2P43241 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.22□□□□□ -1.41
Cdx2P43241 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.22□□□□□ -1.41
Cdx2P43241 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.22□□□□□ -1.41
Cdx2P43241 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdx2P43241 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.22□□□□□ -1.41
Cdx2P43241 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx2P43241 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.22□□□□□ -1.41
Cdx2P43241 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdx2P43241 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdx2P43241 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cdx2P43241 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Cdx2P43241 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.21□□□□□ -1.41
Cdx2P43241 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdx2P43241 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cdx2P43241 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Cdx2P43241 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdx2P43241 Gm26079-201ENSMUST00000104066 133 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Gm24173-201ENSMUST00000104130 128 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Gm12643-201ENSMUST00000116078 374 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Gm13222-201ENSMUST00000119638 138 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdx2P43241 Gm23030-201ENSMUST00000158004 273 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdx2P43241 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdx2P43241 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Gm44221-201ENSMUST00000203552 388 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Gm18781-201ENSMUST00000211252 924 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Gm45514-201ENSMUST00000211531 689 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Gm7570-201ENSMUST00000215246 698 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdx2P43241 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.21□□□□□ -1.42
Cdx2P43241 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdx2P43241 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdx2P43241 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdx2P43241 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Cdx2P43241 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdx2P43241 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdx2P43241 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx2P43241 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Cdx2P43241 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Cdx2P43241 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Cdx2P43241 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdx2P43241 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdx2P43241 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Cdx2P43241 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdx2P43241 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cdx2P43241 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdx2P43241 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Cdx2P43241 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Gm14938-201ENSMUST00000119482 943 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Gm24065-201ENSMUST00000157487 264 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Gm24719-201ENSMUST00000157520 110 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Gm23276-201ENSMUST00000157913 138 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Gm24179-201ENSMUST00000158925 127 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Gm25065-201ENSMUST00000177914 132 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms