Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc180J3QNE4 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc180J3QNE4 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc180J3QNE4 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc180J3QNE4 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Ccdc180J3QNE4 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc180J3QNE4 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Gm9403-201ENSMUST00000196299 2181 ntBASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Gm37430-201ENSMUST00000193039 196 ntBASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Gm29778-201ENSMUST00000201667 466 ntBASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Gm45514-201ENSMUST00000211531 689 ntBASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 AC154616.2-201ENSMUST00000227978 398 ntBASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Gm7048-201ENSMUST00000199395 1891 ntBASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Gm42894-201ENSMUST00000200788 3390 ntBASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc180J3QNE4 Gm45084-201ENSMUST00000207096 1957 ntBASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm12874-201ENSMUST00000117190 913 ntBASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm11498-201ENSMUST00000120660 949 ntBASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm23030-201ENSMUST00000158004 273 ntBASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm27960-201ENSMUST00000183445 184 ntBASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm43945-201ENSMUST00000203595 754 ntBASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm44213-201ENSMUST00000204977 703 ntBASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm16335-201ENSMUST00000077495 309 ntBASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm37169-201ENSMUST00000195599 4161 ntBASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc180J3QNE4 Gm11318-201ENSMUST00000118640 961 ntBASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Gm23539-201ENSMUST00000157537 224 ntBASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Mir7674-201ENSMUST00000184964 63 ntBASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Gm43561-201ENSMUST00000199866 448 ntBASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Gm44795-201ENSMUST00000205496 319 ntBASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Gm6056-201ENSMUST00000221253 488 ntBASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc180J3QNE4 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Gm18259-201ENSMUST00000220991 2010 ntBASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Mir678-201ENSMUST00000102114 84 ntBASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Gm15048-201ENSMUST00000118201 954 ntBASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Gm8317-201ENSMUST00000121261 471 ntBASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Gm25445-201ENSMUST00000158996 299 ntBASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Mir7020-201ENSMUST00000183787 70 ntBASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Gm38142-201ENSMUST00000194093 3555 ntBASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ccdc180J3QNE4 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Gm15616-201ENSMUST00000118662 375 ntBASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Gm15186-201ENSMUST00000119345 563 ntBASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Gm5401-201ENSMUST00000122444 365 ntBASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Gm5947-201ENSMUST00000179156 714 ntBASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Gm5645-201ENSMUST00000179597 714 ntBASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Gm28080-201ENSMUST00000188552 722 ntBASIC11.7□□□□□ -0.54
Ccdc180J3QNE4 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms