Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.13□□□□□ -1.27
Scn3aA2ASI5 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Scn3aA2ASI5 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.13□□□□□ -1.27
Scn3aA2ASI5 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Scn3aA2ASI5 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.13□□□□□ -1.27
Scn3aA2ASI5 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm43766-201ENSMUST00000200590 5417 ntBASIC7.12□□□□□ -1.27
Scn3aA2ASI5 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm23440-201ENSMUST00000104299 130 ntBASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm14925-201ENSMUST00000120611 438 ntBASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm12399-201ENSMUST00000121475 446 ntBASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm7570-201ENSMUST00000215246 698 ntBASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm24200-201ENSMUST00000082955 157 ntBASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Scn3aA2ASI5 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm23450-201ENSMUST00000178285 91 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm37187-201ENSMUST00000193425 341 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 AC157822.1-201ENSMUST00000196643 80 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm43561-201ENSMUST00000199866 448 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm45724-201ENSMUST00000213031 420 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm18863-201ENSMUST00000217004 1299 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 AC166574.3-201ENSMUST00000226725 367 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm2531-201ENSMUST00000075609 512 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm11972-201ENSMUST00000118514 389 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm8317-201ENSMUST00000121261 471 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm25065-201ENSMUST00000177914 132 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm25891-201ENSMUST00000180050 132 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm17934-201ENSMUST00000192818 422 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm37477-201ENSMUST00000195215 884 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Scn3aA2ASI5 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms