Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Scn1aA2APX8 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.68□□□□□ -1.34
Scn1aA2APX8 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm24687-201ENSMUST00000157758 241 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm7626-201ENSMUST00000195801 353 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm7499-201ENSMUST00000210423 813 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm15332-201ENSMUST00000118386 357 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm23757-201ENSMUST00000158353 100 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm25487-201ENSMUST00000158725 125 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm28080-201ENSMUST00000188552 722 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm21524-201ENSMUST00000190499 696 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm21715-201ENSMUST00000191056 694 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm8009-201ENSMUST00000191672 436 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm37511-201ENSMUST00000192901 294 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm44360-201ENSMUST00000200081 82 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm3266-201ENSMUST00000217832 591 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Gm18592-201ENSMUST00000221529 276 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.67□□□□□ -1.34
Scn1aA2APX8 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Scn1aA2APX8 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm13114-201ENSMUST00000117605 106 ntBASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm12399-201ENSMUST00000121475 446 ntBASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm10410-201ENSMUST00000180138 384 ntBASIC6.66□□□□□ -1.34
Scn1aA2APX8 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm26898-201ENSMUST00000181678 384 ntBASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm37901-201ENSMUST00000195107 514 ntBASIC6.66□□□□□ -1.34
Scn1aA2APX8 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.66□□□□□ -1.34
Scn1aA2APX8 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm28392-201ENSMUST00000077630 393 ntBASIC6.66□□□□□ -1.34
Scn1aA2APX8 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.66□□□□□ -1.34
Scn1aA2APX8 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Scn1aA2APX8 Gm24709-201ENSMUST00000104123 132 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms