Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm18290-201ENSMUST00000202900 844 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm4605-201ENSMUST00000203148 625 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm44232-201ENSMUST00000204537 225 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm18914-201ENSMUST00000214625 616 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm3678-201ENSMUST00000218888 492 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 AC211878.5-201ENSMUST00000221697 409 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Mir296-201ENSMUST00000083587 79 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
H2afb3S4R1G7 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm10259-201ENSMUST00000091289 1590 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Mir678-201ENSMUST00000102114 84 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm26419-201ENSMUST00000104272 133 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm25631-201ENSMUST00000104390 130 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm26146-201ENSMUST00000104478 185 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm10936-201ENSMUST00000105264 252 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm7091-201ENSMUST00000116438 586 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm6743-201ENSMUST00000117345 1066 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm14865-201ENSMUST00000117523 494 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm12447-201ENSMUST00000119110 470 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm14613-201ENSMUST00000122239 752 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm25277-201ENSMUST00000157266 324 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm26211-201ENSMUST00000158578 129 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm17205-201ENSMUST00000168370 1207 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm27026-201ENSMUST00000183003 892 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Mir6241-201ENSMUST00000184225 103 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm5575-201ENSMUST00000190879 398 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm28926-201ENSMUST00000191063 680 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm18547-201ENSMUST00000192439 811 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm9517-201ENSMUST00000195021 874 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm42558-201ENSMUST00000200982 265 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm43867-201ENSMUST00000203860 525 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm44861-201ENSMUST00000208325 1220 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm31663-202ENSMUST00000208481 1190 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm7943-201ENSMUST00000212078 1034 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm46203-201ENSMUST00000218130 478 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 AC116502.1-201ENSMUST00000220989 291 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm5655-201ENSMUST00000221078 901 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 AC124489.1-201ENSMUST00000225852 526 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm10540-201ENSMUST00000097581 276 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm37429-201ENSMUST00000193807 1799 ntBASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
H2afb3S4R1G7 Gm29761-201ENSMUST00000215964 1939 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms