Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm25660-201ENSMUST00000158470 104 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm32983-201ENSMUST00000208500 505 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm18620-201ENSMUST00000222295 324 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm22351-201ENSMUST00000083925 107 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm13265-201ENSMUST00000118090 421 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm12135-201ENSMUST00000119170 466 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm24781-201ENSMUST00000157636 117 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm44162-201ENSMUST00000203543 544 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdc40Q9DC48 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms