Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Mir680-1-201ENSMUST00000102257 109 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm23979-201ENSMUST00000104071 128 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm11581-201ENSMUST00000122024 763 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm10410-201ENSMUST00000180138 384 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm26898-201ENSMUST00000181678 384 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm8183-201ENSMUST00000183134 980 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm43141-201ENSMUST00000199695 274 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm9315-201ENSMUST00000222696 908 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Smc1aQ9CU62 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm12140-201ENSMUST00000121214 544 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm23903-201ENSMUST00000157566 131 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm6061-201ENSMUST00000175860 492 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm9504-201ENSMUST00000196322 468 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm19088-201ENSMUST00000198800 566 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm43089-201ENSMUST00000199162 275 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms