Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm8182-201ENSMUST00000197863 769 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm43377-201ENSMUST00000201640 455 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm44984-201ENSMUST00000207802 394 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm32899-201ENSMUST00000219694 207 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm18628-201ENSMUST00000220584 475 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm5446-201ENSMUST00000091762 784 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Use1Q9CQ56 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.09□□□□□ -1.44
Use1Q9CQ56 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.09□□□□□ -1.44
Use1Q9CQ56 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Use1Q9CQ56 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
Use1Q9CQ56 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm14904-201ENSMUST00000117067 335 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm9836-201ENSMUST00000117132 216 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm13207-201ENSMUST00000119862 773 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm23071-201ENSMUST00000158242 115 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm9529-201ENSMUST00000177598 579 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm8506-201ENSMUST00000186661 829 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm29141-201ENSMUST00000190357 882 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm45279-201ENSMUST00000210315 391 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm45725-201ENSMUST00000212962 337 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm9788-201ENSMUST00000057038 906 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.08□□□□□ -1.44
Use1Q9CQ56 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Use1Q9CQ56 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm11501-201ENSMUST00000118039 581 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm12937-201ENSMUST00000118333 448 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm12189-201ENSMUST00000119779 912 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm4992-201ENSMUST00000120256 768 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm24545-201ENSMUST00000158651 85 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms