Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cstf1Q99LC2 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm8424-201ENSMUST00000117716 988 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm15616-201ENSMUST00000118662 375 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm6382-201ENSMUST00000118873 942 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm24733-201ENSMUST00000158863 253 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm18447-201ENSMUST00000187501 307 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 A1cf-203ENSMUST00000224400 1204 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Olfr467-201ENSMUST00000084756 927 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf1Q99LC2 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Gm13991-201ENSMUST00000120190 648 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Gm20432-201ENSMUST00000173716 250 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Gm18805-201ENSMUST00000206872 655 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf1Q99LC2 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf1Q99LC2 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.59□□□□□ -1.35
Cstf1Q99LC2 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.59□□□□□ -1.35
Cstf1Q99LC2 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Cstf1Q99LC2 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf1Q99LC2 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.59□□□□□ -1.35
Cstf1Q99LC2 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms