Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm22702-201ENSMUST00000175372 69 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm24756-201ENSMUST00000177002 96 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm8192-201ENSMUST00000182196 958 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm44234-201ENSMUST00000204246 900 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm44111-201ENSMUST00000204649 399 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm18907-201ENSMUST00000209719 932 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm18585-201ENSMUST00000215197 556 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm8275-201ENSMUST00000219732 424 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm26130-201ENSMUST00000083171 138 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm17184-201ENSMUST00000111864 462 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Mup-ps13-201ENSMUST00000120662 545 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Mup-ps1-201ENSMUST00000120720 544 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm14463-201ENSMUST00000121117 498 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm16363-201ENSMUST00000132460 877 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm23891-201ENSMUST00000158114 138 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm22111-201ENSMUST00000178010 79 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm23687-201ENSMUST00000178664 79 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm24566-201ENSMUST00000179286 79 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm23305-201ENSMUST00000179342 79 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm26389-201ENSMUST00000179819 79 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm22130-201ENSMUST00000179979 79 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm22393-201ENSMUST00000180153 79 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm25085-201ENSMUST00000180298 79 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm37871-201ENSMUST00000194973 688 ntBASIC6.48□□□□□ -1.37
Clrn1Q8K445 Gm4525-201ENSMUST00000198831 254 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms