Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 AU020206-202ENSMUST00000206358 3009 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm12842-201ENSMUST00000117298 476 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm15750-201ENSMUST00000120970 616 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Mir7082-201ENSMUST00000183526 92 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm19087-201ENSMUST00000191430 946 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm6074-201ENSMUST00000193340 451 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm43689-201ENSMUST00000195951 427 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm8920-201ENSMUST00000196153 924 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm30708-201ENSMUST00000202183 312 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm46203-201ENSMUST00000218130 478 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm6575-201ENSMUST00000222946 697 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm23238-201ENSMUST00000083007 164 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Dcdc5-202ENSMUST00000122388 4957 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm12447-201ENSMUST00000119110 470 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm12135-201ENSMUST00000119170 466 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm3140-201ENSMUST00000163523 481 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm26381-201ENSMUST00000174895 92 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm26607-201ENSMUST00000180661 867 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm43762-201ENSMUST00000201521 295 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm44162-201ENSMUST00000203543 544 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm25587-201ENSMUST00000082498 166 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 AC114585.1-201ENSMUST00000228080 3680 ntBASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Nup88Q8CEC0 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm44436-201ENSMUST00000204200 1494 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms