Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm14667-201ENSMUST00000119448 1350 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm26079-201ENSMUST00000104066 133 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm25916-201ENSMUST00000104263 131 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm13732-201ENSMUST00000117753 535 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm15311-201ENSMUST00000119682 282 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm15305-201ENSMUST00000120354 288 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm13121-201ENSMUST00000120637 632 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm15187-201ENSMUST00000122329 264 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm24781-201ENSMUST00000157636 117 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm27360-201ENSMUST00000183487 80 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm29197-201ENSMUST00000185922 702 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm44342-201ENSMUST00000196874 129 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm44383-201ENSMUST00000198940 129 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm7463-201ENSMUST00000201541 547 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 AC132121.1-201ENSMUST00000220774 332 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm7252-201ENSMUST00000223284 456 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm26063-201ENSMUST00000083378 107 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Mir412-201ENSMUST00000083636 80 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc40Q8BI79 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Ccdc40Q8BI79 Robo2-210ENSMUST00000226478 8059 ntBASIC6.84□□□□□ -1.32
Ccdc40Q8BI79 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm13141-201ENSMUST00000117417 456 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm13265-201ENSMUST00000118090 421 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm11972-201ENSMUST00000118514 389 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm16418-201ENSMUST00000118577 171 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm15153-201ENSMUST00000119867 274 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm24545-201ENSMUST00000158651 85 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm8502-201ENSMUST00000185708 901 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm21147-201ENSMUST00000186046 913 ntBASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc40Q8BI79 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms