Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx55Q6ZPL9 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm37077-201ENSMUST00000195723 3691 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm12643-201ENSMUST00000116078 374 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm12105-201ENSMUST00000120846 779 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm23071-201ENSMUST00000158242 115 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm27972-201ENSMUST00000184720 137 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm29197-201ENSMUST00000185922 702 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Ighv1-44-201ENSMUST00000195597 352 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm17824-201ENSMUST00000197690 805 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 n-TStga1-201ENSMUST00000199903 109 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Olfr467-201ENSMUST00000084756 927 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm7731-201ENSMUST00000091759 470 ntBASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx55Q6ZPL9 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Ddx55Q6ZPL9 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.2
Ddx55Q6ZPL9 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm12565-201ENSMUST00000119004 649 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm20401-201ENSMUST00000173717 212 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm44312-201ENSMUST00000203536 469 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm44849-201ENSMUST00000207595 484 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 AC211878.5-201ENSMUST00000221697 409 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 CT025525.1-201ENSMUST00000226325 1054 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 AC125539.1-202ENSMUST00000226449 670 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm8256-203ENSMUST00000228692 591 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Ddx55Q6ZPL9 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms