Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm5387-201ENSMUST00000119776 857 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm14614-201ENSMUST00000119873 384 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm15596-201ENSMUST00000121139 784 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm12101-201ENSMUST00000121590 390 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm12175-201ENSMUST00000122081 345 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm7613-201ENSMUST00000139070 487 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm26037-201ENSMUST00000158150 311 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm29663-201ENSMUST00000186962 853 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm45177-201ENSMUST00000209104 2307 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.24□□□□□ -1.25
Usp49Q6P9L4 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm7494-201ENSMUST00000121248 441 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm11609-201ENSMUST00000121926 793 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm25435-201ENSMUST00000158277 267 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm18586-201ENSMUST00000217265 518 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm19189-201ENSMUST00000221689 754 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm8822-201ENSMUST00000118948 2347 ntBASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp49Q6P9L4 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm23979-201ENSMUST00000104071 128 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm22710-201ENSMUST00000116892 125 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm6654-201ENSMUST00000118950 348 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm11976-201ENSMUST00000119236 295 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm16016-201ENSMUST00000120831 550 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm21990-201ENSMUST00000124692 383 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm21877-201ENSMUST00000185640 694 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm5853-201ENSMUST00000197183 632 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.22□□□□□ -1.25
Usp49Q6P9L4 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms