Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm42753-201ENSMUST00000196718 1268 ntBASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Gm4972-201ENSMUST00000211108 1254 ntBASIC13.11□□□□□ -0.31
Trim41Q5NCC3 AC154806.3-201ENSMUST00000227376 439 ntBASIC13.11□□□□□ -0.31
Trim41Q5NCC3 AC154806.4-201ENSMUST00000227406 439 ntBASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 AC165260.6-202ENSMUST00000224959 1958 ntBASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm37630-201ENSMUST00000194210 1456 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm43498-201ENSMUST00000202002 1486 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Dgkh-206ENSMUST00000228362 3308 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm13176-201ENSMUST00000117910 477 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm12518-201ENSMUST00000122075 779 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm15116-201ENSMUST00000122248 663 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm28586-201ENSMUST00000189857 456 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm44861-201ENSMUST00000208325 1220 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm45734-201ENSMUST00000211916 411 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 AC167669.3-201ENSMUST00000224720 393 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 AC158392.2-201ENSMUST00000225402 969 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm5514-201ENSMUST00000060477 306 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm18957-201ENSMUST00000197623 1813 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm19801-201ENSMUST00000218231 1882 ntBASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim41Q5NCC3 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm11416-201ENSMUST00000119111 863 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm7700-201ENSMUST00000120273 970 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm11371-201ENSMUST00000120294 385 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm24395-201ENSMUST00000158139 125 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Mir3085-201ENSMUST00000175493 89 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm43295-201ENSMUST00000201439 412 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm29817-201ENSMUST00000210098 172 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm45690-201ENSMUST00000210775 246 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 AV026068-219ENSMUST00000224148 933 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 AV026068-220ENSMUST00000224153 1147 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms