Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm12653-201ENSMUST00000117778 561 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm12713-201ENSMUST00000118404 764 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm15316-201ENSMUST00000121082 421 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm23888-201ENSMUST00000122690 253 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm16357-201ENSMUST00000144091 474 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm22533-201ENSMUST00000158821 274 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm26528-201ENSMUST00000181965 283 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm43136-201ENSMUST00000200403 636 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm44279-201ENSMUST00000205154 472 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.57□□□□□ -1.36
Usp39Q3TIX9 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp39Q3TIX9 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm12939-201ENSMUST00000117303 165 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm11858-201ENSMUST00000117935 838 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm12383-201ENSMUST00000120628 760 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm25102-201ENSMUST00000122479 112 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm25722-201ENSMUST00000157498 279 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm8550-201ENSMUST00000161621 653 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm3585-201ENSMUST00000173438 875 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm25640-201ENSMUST00000175378 125 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm19480-201ENSMUST00000185547 667 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm38373-201ENSMUST00000192042 288 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm45100-201ENSMUST00000209153 391 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 AC120394.1-201ENSMUST00000217153 351 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 AC132237.2-201ENSMUST00000221702 1209 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.56□□□□□ -1.36
Usp39Q3TIX9 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.56□□□□□ -1.36
Usp39Q3TIX9 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms