Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm9001-201ENSMUST00000121642 399 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm25395-201ENSMUST00000157343 272 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm24545-201ENSMUST00000158651 85 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm2959-201ENSMUST00000169844 621 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm26991-201ENSMUST00000180950 620 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29048-201ENSMUST00000185342 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29403-201ENSMUST00000185491 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28234-201ENSMUST00000185657 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28248-201ENSMUST00000186093 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29633-202ENSMUST00000186217 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28829-201ENSMUST00000186231 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28261-201ENSMUST00000186417 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28983-201ENSMUST00000186685 614 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28815-201ENSMUST00000186751 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28608-201ENSMUST00000186860 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28122-201ENSMUST00000187088 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28150-201ENSMUST00000187305 614 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28420-201ENSMUST00000187340 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28106-201ENSMUST00000187640 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28698-201ENSMUST00000187734 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29224-201ENSMUST00000187965 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29189-201ENSMUST00000188018 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29476-201ENSMUST00000188397 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29505-201ENSMUST00000188424 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28125-201ENSMUST00000188470 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29391-201ENSMUST00000188545 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29280-201ENSMUST00000188571 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28349-201ENSMUST00000188590 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29652-201ENSMUST00000188622 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28819-206ENSMUST00000188816 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29079-201ENSMUST00000188875 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28213-201ENSMUST00000189183 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29382-201ENSMUST00000189549 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29377-205ENSMUST00000189603 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28327-201ENSMUST00000189638 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28790-201ENSMUST00000189642 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28907-201ENSMUST00000189700 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29586-207ENSMUST00000189745 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29115-201ENSMUST00000189870 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28366-201ENSMUST00000190147 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29212-201ENSMUST00000190384 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29533-201ENSMUST00000190403 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28162-201ENSMUST00000190545 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29030-201ENSMUST00000190848 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28742-201ENSMUST00000191001 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28899-201ENSMUST00000191161 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29567-201ENSMUST00000191188 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28222-201ENSMUST00000191210 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28776-201ENSMUST00000191282 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29306-201ENSMUST00000191366 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29618-201ENSMUST00000191423 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28136-210ENSMUST00000191432 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm29251-201ENSMUST00000191480 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28658-201ENSMUST00000191532 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm32180-201ENSMUST00000192415 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm30598-201ENSMUST00000192620 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm8101-201ENSMUST00000192796 478 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm37627-201ENSMUST00000194585 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm34274-201ENSMUST00000195825 615 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm7733-201ENSMUST00000199038 919 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm43659-201ENSMUST00000200894 628 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC6.17□□□□□ -1.42
Col8a1Q00780 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm44961-201ENSMUST00000207450 196 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.17□□□□□ -1.42
Col8a1Q00780 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC6.17□□□□□ -1.42
Col8a1Q00780 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 AC192091.1-201ENSMUST00000218668 439 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC6.17□□□□□ -1.42
Col8a1Q00780 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm10126-201ENSMUST00000221732 168 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 CT009733.1-202ENSMUST00000224941 441 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 AC116395.1-201ENSMUST00000225480 1143 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 AC112972.1-201ENSMUST00000227329 365 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 AC124103.1-201ENSMUST00000227564 1027 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Olfr683-201ENSMUST00000061284 960 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms