Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.08□□□□□ -1.28
Shmt1P50431 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm12586-201ENSMUST00000117328 1316 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm11472-201ENSMUST00000121305 556 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm12998-201ENSMUST00000122445 789 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm24781-201ENSMUST00000157636 117 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm23031-201ENSMUST00000157998 119 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm27299-201ENSMUST00000184593 103 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm29663-201ENSMUST00000186962 853 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm21728-201ENSMUST00000188442 695 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm21889-201ENSMUST00000188487 695 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm20932-201ENSMUST00000189115 694 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm21920-201ENSMUST00000190042 695 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm3841-201ENSMUST00000191399 451 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm43774-201ENSMUST00000196327 878 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm1969-201ENSMUST00000198125 1220 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm44869-201ENSMUST00000208836 357 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Shmt1P50431 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 AC159297.2-201ENSMUST00000219567 1075 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 AC158631.2-201ENSMUST00000219999 478 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Gm5928-201ENSMUST00000221839 466 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 AC134335.1-201ENSMUST00000227626 329 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm22581-201ENSMUST00000083735 136 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Shmt1P50431 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.07□□□□□ -1.28
Shmt1P50431 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shmt1P50431 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.07□□□□□ -1.28
Shmt1P50431 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Shmt1P50431 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Shmt1P50431 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shmt1P50431 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shmt1P50431 AC153959.1-201ENSMUST00000213617 1694 ntBASIC7.06□□□□□ -1.28
Shmt1P50431 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shmt1P50431 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shmt1P50431 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shmt1P50431 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC7.06□□□□□ -1.28
Shmt1P50431 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms