Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Tnfsf4P43488 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Tnfsf4P43488 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm26422-201ENSMUST00000104276 132 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm6142-201ENSMUST00000120290 325 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm15187-201ENSMUST00000122329 264 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm24359-201ENSMUST00000158418 221 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm17895-201ENSMUST00000194028 874 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm9419-201ENSMUST00000200672 567 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm44112-201ENSMUST00000204787 372 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm18040-201ENSMUST00000217922 827 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.13□□□□□ -1.43
Tnfsf4P43488 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Tnfsf4P43488 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm14733-201ENSMUST00000117680 133 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm12115-201ENSMUST00000119969 447 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm16511-201ENSMUST00000120019 564 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm13615-201ENSMUST00000120242 1612 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm5166-201ENSMUST00000121332 573 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm26037-201ENSMUST00000158150 311 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Mir7685-201ENSMUST00000183555 62 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm8860-201ENSMUST00000193160 445 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm5853-201ENSMUST00000197183 632 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms