Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
HttP42859 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HttP42859 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
HttP42859 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HttP42859 Gtf2a1-201ENSMUST00000021345 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
HttP42859 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HttP42859 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.58□□□□□ -1.36
HttP42859 Mir6539-201ENSMUST00000183732 110 ntBASIC6.58□□□□□ -1.36
HttP42859 Mir7687-201ENSMUST00000184722 59 ntBASIC6.58□□□□□ -1.36
HttP42859 Gm29160-201ENSMUST00000190094 699 ntBASIC6.58□□□□□ -1.36
HttP42859 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.58□□□□□ -1.36
HttP42859 Gm8826-201ENSMUST00000193161 948 ntBASIC6.58□□□□□ -1.36
HttP42859 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.58□□□□□ -1.36
HttP42859 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.58□□□□□ -1.36
HttP42859 Gm17999-201ENSMUST00000211568 542 ntBASIC6.58□□□□□ -1.36
HttP42859 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC6.58□□□□□ -1.36
HttP42859 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.58□□□□□ -1.36
HttP42859 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.58□□□□□ -1.36
HttP42859 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
HttP42859 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
HttP42859 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.58□□□□□ -1.36
HttP42859 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
HttP42859 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HttP42859 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Gm22273-201ENSMUST00000104040 132 ntBASIC6.57□□□□□ -1.36
HttP42859 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.57□□□□□ -1.36
HttP42859 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.57□□□□□ -1.36
HttP42859 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.57□□□□□ -1.36
HttP42859 Gm18343-201ENSMUST00000172802 604 ntBASIC6.57□□□□□ -1.36
HttP42859 Gm20545-201ENSMUST00000174739 210 ntBASIC6.57□□□□□ -1.36
HttP42859 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.57□□□□□ -1.36
HttP42859 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.57□□□□□ -1.36
HttP42859 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.57□□□□□ -1.36
HttP42859 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HttP42859 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HttP42859 Gm23502-201ENSMUST00000083902 145 ntBASIC6.57□□□□□ -1.36
HttP42859 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
HttP42859 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
HttP42859 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HttP42859 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.57□□□□□ -1.36
HttP42859 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.57□□□□□ -1.36
HttP42859 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
HttP42859 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.57□□□□□ -1.36
HttP42859 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Gm42972-201ENSMUST00000196937 5617 ntBASIC6.57□□□□□ -1.36
HttP42859 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.57□□□□□ -1.36
HttP42859 Gm25439-201ENSMUST00000158280 131 ntBASIC6.57□□□□□ -1.36
HttP42859 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HttP42859 Gm10988-201ENSMUST00000209150 1088 ntBASIC6.57□□□□□ -1.36
HttP42859 Gm6863-201ENSMUST00000052882 636 ntBASIC6.57□□□□□ -1.36
HttP42859 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HttP42859 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HttP42859 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
HttP42859 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC6.57□□□□□ -1.36
HttP42859 Gm2065-201ENSMUST00000194697 2757 ntBASIC6.57□□□□□ -1.36
HttP42859 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HttP42859 Gm8534-201ENSMUST00000118553 766 ntBASIC6.56□□□□□ -1.36
HttP42859 Gm8669-201ENSMUST00000183839 945 ntBASIC6.56□□□□□ -1.36
HttP42859 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.56□□□□□ -1.36
HttP42859 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.56□□□□□ -1.36
HttP42859 Gm34224-201ENSMUST00000204606 364 ntBASIC6.56□□□□□ -1.36
HttP42859 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HttP42859 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HttP42859 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
HttP42859 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC6.56□□□□□ -1.36
HttP42859 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms