Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox6P40645 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Sox6P40645 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sox6P40645 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
Sox6P40645 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sox6P40645 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Gm13222-201ENSMUST00000119638 138 ntBASIC6.07□□□□□ -1.44
Sox6P40645 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.07□□□□□ -1.44
Sox6P40645 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.07□□□□□ -1.44
Sox6P40645 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm6726-201ENSMUST00000172786 681 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.07□□□□□ -1.44
Sox6P40645 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm18849-201ENSMUST00000189861 560 ntBASIC6.07□□□□□ -1.44
Sox6P40645 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Gm31711-201ENSMUST00000220687 196 ntBASIC6.07□□□□□ -1.44
Sox6P40645 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Gm33312-201ENSMUST00000222443 332 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Gm7252-201ENSMUST00000223284 456 ntBASIC6.07□□□□□ -1.44
Sox6P40645 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.07□□□□□ -1.44
Sox6P40645 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.07□□□□□ -1.44
Sox6P40645 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.07□□□□□ -1.44
Sox6P40645 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.07□□□□□ -1.44
Sox6P40645 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox6P40645 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox6P40645 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox6P40645 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Sox6P40645 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Sox6P40645 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Gm22256-201ENSMUST00000102291 107 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Sox6P40645 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Sox6P40645 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Gm11501-201ENSMUST00000118039 581 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm5387-201ENSMUST00000119776 857 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Sox6P40645 Gm11689-201ENSMUST00000120766 302 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm13462-201ENSMUST00000121472 961 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Gm22523-201ENSMUST00000158696 100 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm24176-201ENSMUST00000158928 121 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.06□□□□□ -1.44
Sox6P40645 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Gm44370-201ENSMUST00000175436 112 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm25617-201ENSMUST00000179548 133 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
Sox6P40645 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.06□□□□□ -1.44
Sox6P40645 Gm7867-201ENSMUST00000189856 546 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm37871-201ENSMUST00000194973 688 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm25617-202ENSMUST00000198387 132 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms