Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.09□□□□□ -1.43
Sftpa1P35242 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm9519-201ENSMUST00000206108 1337 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sftpa1P35242 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm26289-201ENSMUST00000104169 131 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm22372-201ENSMUST00000104589 136 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm12643-201ENSMUST00000116078 374 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm12565-201ENSMUST00000119004 649 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm14938-201ENSMUST00000119482 943 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Snora47-201ENSMUST00000157483 138 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm23343-201ENSMUST00000158964 143 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Mir3097-201ENSMUST00000175356 67 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sftpa1P35242 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm18839-201ENSMUST00000204292 670 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.09□□□□□ -1.43
Sftpa1P35242 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sftpa1P35242 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sftpa1P35242 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sftpa1P35242 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Sftpa1P35242 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.09□□□□□ -1.44
Sftpa1P35242 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sftpa1P35242 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Sftpa1P35242 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Sftpa1P35242 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Sftpa1P35242 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.09□□□□□ -1.44
Sftpa1P35242 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.09□□□□□ -1.44
Sftpa1P35242 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm24541-201ENSMUST00000103871 96 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm13400-201ENSMUST00000117436 380 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm11976-201ENSMUST00000119236 295 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.08□□□□□ -1.44
Sftpa1P35242 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm23071-201ENSMUST00000158242 115 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm24179-201ENSMUST00000158925 127 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Mir5107-201ENSMUST00000175586 88 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm25065-201ENSMUST00000177914 132 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm25891-201ENSMUST00000180050 132 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Mir8097-201ENSMUST00000185150 119 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm18558-201ENSMUST00000186253 1214 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm18409-202ENSMUST00000220105 529 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm9315-201ENSMUST00000222696 908 ntBASIC6.08□□□□□ -1.44
Sftpa1P35242 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sftpa1P35242 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Sftpa1P35242 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms