Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Lire1P11260 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
Lire1P11260 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Lire1P11260 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Lire1P11260 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Lire1P11260 Gm17170-201ENSMUST00000112785 316 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm12931-201ENSMUST00000117046 324 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm9435-201ENSMUST00000120379 877 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm23657-201ENSMUST00000122623 294 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm23888-201ENSMUST00000122690 253 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.47□□□□□ -1.37
Lire1P11260 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.47□□□□□ -1.37
Lire1P11260 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.47□□□□□ -1.37
Lire1P11260 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Mir3078-201ENSMUST00000175231 87 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Mir6337-201ENSMUST00000184194 105 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm27178-201ENSMUST00000184962 340 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm5261-201ENSMUST00000185860 713 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.47□□□□□ -1.37
Lire1P11260 Gm43382-201ENSMUST00000198954 838 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm43033-201ENSMUST00000199682 425 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.47□□□□□ -1.37
Lire1P11260 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm8168-201ENSMUST00000209631 948 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.47□□□□□ -1.37
Lire1P11260 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.47□□□□□ -1.37
Lire1P11260 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.47□□□□□ -1.37
Lire1P11260 AC129323.1-201ENSMUST00000216733 470 ntBASIC6.47□□□□□ -1.37
Lire1P11260 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.47□□□□□ -1.37
Lire1P11260 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC6.47□□□□□ -1.37
Lire1P11260 Gm31711-201ENSMUST00000220687 196 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.47□□□□□ -1.37
Lire1P11260 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Lire1P11260 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Lire1P11260 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Lire1P11260 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Lire1P11260 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Lire1P11260 Gm24207-201ENSMUST00000082781 108 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Lire1P11260 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.47□□□□□ -1.37
Lire1P11260 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Lire1P11260 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.47□□□□□ -1.37
Lire1P11260 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Lire1P11260 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.46□□□□□ -1.37
Lire1P11260 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Lire1P11260 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.46□□□□□ -1.37
Lire1P11260 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.46□□□□□ -1.37
Lire1P11260 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.46□□□□□ -1.37
Lire1P11260 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Lire1P11260 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Gm14489-201ENSMUST00000120868 901 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm12181-201ENSMUST00000121448 531 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm13282-201ENSMUST00000121577 545 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm14380-201ENSMUST00000122298 431 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms