Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm25785-201ENSMUST00000104129 125 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm22284-201ENSMUST00000104132 132 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm14870-201ENSMUST00000118414 156 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm13357-201ENSMUST00000120528 537 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Mir6348-201ENSMUST00000183804 120 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm29784-201ENSMUST00000196217 406 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm43576-201ENSMUST00000197937 871 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm4870-201ENSMUST00000198525 1251 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm44213-201ENSMUST00000204977 703 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm5324-201ENSMUST00000208115 476 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm17997-201ENSMUST00000211801 840 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 CT009527.2-201ENSMUST00000225386 606 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Thap6-201ENSMUST00000191860 3151 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm22267-201ENSMUST00000104008 131 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm11445-201ENSMUST00000119101 532 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm15750-201ENSMUST00000120970 616 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm26023-201ENSMUST00000122722 313 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Mir6337-201ENSMUST00000184194 105 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm20926-201ENSMUST00000194457 696 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm42708-201ENSMUST00000196332 905 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 AC148328.2-201ENSMUST00000216960 262 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 AC154618.2-201ENSMUST00000228299 452 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm10108-201ENSMUST00000078246 319 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Olfr687-201ENSMUST00000098154 938 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Chmp6P0C0A3 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7□□□□□ -1.29
Chmp6P0C0A3 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7□□□□□ -1.29
Chmp6P0C0A3 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7□□□□□ -1.29
Chmp6P0C0A3 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Chmp6P0C0A3 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7□□□□□ -1.29
Chmp6P0C0A3 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7□□□□□ -1.29
Chmp6P0C0A3 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Chmp6P0C0A3 Gm44723-201ENSMUST00000207369 4000 ntBASIC7□□□□□ -1.29
Chmp6P0C0A3 Gm9226-201ENSMUST00000188352 3489 ntBASIC7□□□□□ -1.29
Chmp6P0C0A3 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC7□□□□□ -1.29
Chmp6P0C0A3 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms