Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC124715.1-201ENSMUST00000228480 754 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm26072-201ENSMUST00000083135 107 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm23452-201ENSMUST00000083327 107 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Hoxd3P09027 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm38243-201ENSMUST00000194737 1567 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm43369-201ENSMUST00000196373 1552 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Dubr-205ENSMUST00000191079 2105 ntTSL 2 BASIC6.38□□□□□ -1.39
Hoxd3P09027 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm37675-201ENSMUST00000192303 2847 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Cdh26-202ENSMUST00000108912 2908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Tdrd5-204ENSMUST00000167528 3210 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gpnmb-201ENSMUST00000031840 3701 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 AC132474.1-201ENSMUST00000214407 3686 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Acvr1-204ENSMUST00000112601 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm9936-201ENSMUST00000201635 2925 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm42847-201ENSMUST00000201732 2553 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm28898-201ENSMUST00000189604 2167 ntTSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 CT009723.1-201ENSMUST00000215057 1803 ntTSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm28906-201ENSMUST00000191371 1779 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm14056-201ENSMUST00000117198 642 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm14885-201ENSMUST00000117969 496 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm14001-201ENSMUST00000118847 247 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm12016-201ENSMUST00000119079 681 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm14238-201ENSMUST00000120227 323 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm2214-201ENSMUST00000121333 330 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm15989-201ENSMUST00000121895 498 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm15877-201ENSMUST00000121897 964 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm10086-201ENSMUST00000136334 354 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm17030-201ENSMUST00000167016 393 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm22166-201ENSMUST00000178419 121 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm23288-201ENSMUST00000179213 121 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm18970-201ENSMUST00000186040 938 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC6.37□□□□□ -1.39
Hoxd3P09027 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm28116-201ENSMUST00000189064 387 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm42959-201ENSMUST00000202184 212 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm18327-201ENSMUST00000202426 830 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm44971-201ENSMUST00000206192 337 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm7839-201ENSMUST00000210755 673 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm19810-201ENSMUST00000218521 251 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 AL606472.1-201ENSMUST00000224628 275 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 AC154738.3-201ENSMUST00000227953 409 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 CT009550.3-201ENSMUST00000228542 455 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gpr55-201ENSMUST00000086975 3721 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms