Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm24176-201ENSMUST00000158928 121 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm17022-201ENSMUST00000166415 922 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm20615-201ENSMUST00000177503 705 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm28145-201ENSMUST00000189742 380 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC5.18□□□□□ -1.58
Hmgb3O54879 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC5.18□□□□□ -1.58
Hmgb3O54879 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm7493-201ENSMUST00000085919 626 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm23748-201ENSMUST00000104227 131 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 n-R5s9-201ENSMUST00000104432 117 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm25725-201ENSMUST00000104528 130 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm9836-201ENSMUST00000117132 216 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm12635-201ENSMUST00000117285 752 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm14865-201ENSMUST00000117523 494 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm14729-201ENSMUST00000118373 689 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm11259-201ENSMUST00000120554 715 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm6081-201ENSMUST00000134472 489 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Mir1930-201ENSMUST00000158799 84 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm7502-201ENSMUST00000169235 733 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm35323-201ENSMUST00000191836 499 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm21461-201ENSMUST00000200382 863 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 AC160635.1-201ENSMUST00000216731 474 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm7252-201ENSMUST00000223284 456 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 AC157650.2-201ENSMUST00000224666 328 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.17□□□□□ -1.58
Hmgb3O54879 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Hmgb3O54879 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Hmgb3O54879 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.17□□□□□ -1.58
Hmgb3O54879 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmgb3O54879 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms