Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.54□□□□□ -1.36
Srp54bE9PXC0 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Srp54bE9PXC0 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Srp54bE9PXC0 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.54□□□□□ -1.36
Srp54bE9PXC0 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Srp54bE9PXC0 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.54□□□□□ -1.36
Srp54bE9PXC0 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm26422-201ENSMUST00000104276 132 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm8250-201ENSMUST00000117398 774 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm15765-201ENSMUST00000118407 910 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm6067-201ENSMUST00000121648 491 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm12152-201ENSMUST00000122465 684 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm25117-201ENSMUST00000157194 144 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm18006-201ENSMUST00000177411 662 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Mir6348-201ENSMUST00000183804 120 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm6074-201ENSMUST00000193340 451 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm43850-201ENSMUST00000202021 578 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 AC159246.1-201ENSMUST00000214478 249 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm46364-201ENSMUST00000218548 319 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm15500-201ENSMUST00000071523 894 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm21731-201ENSMUST00000079524 489 ntBASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Srp54bE9PXC0 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
Srp54bE9PXC0 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm23485-201ENSMUST00000104181 155 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm23276-201ENSMUST00000157913 138 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm23386-201ENSMUST00000158585 144 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm27348-201ENSMUST00000184511 170 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm27998-201ENSMUST00000184902 361 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm8524-201ENSMUST00000186232 379 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm5694-201ENSMUST00000195648 641 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Srp54bE9PXC0 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms