Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm46223-201ENSMUST00000215196 675 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Mylf-ps-201ENSMUST00000222174 421 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 AC116476.1-201ENSMUST00000226274 2318 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm44620-201ENSMUST00000209183 2887 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm24733-201ENSMUST00000158863 253 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm4617-201ENSMUST00000178993 331 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm21241-201ENSMUST00000179551 934 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm26570-201ENSMUST00000180672 342 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm20819-201ENSMUST00000191091 925 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm20871-201ENSMUST00000191322 931 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm43681-201ENSMUST00000201581 1903 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 CT009757.6-201ENSMUST00000220661 2312 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Col6a4A2AX52 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm23910-201ENSMUST00000104597 132 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm2950-201ENSMUST00000185530 520 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm10416-201ENSMUST00000197379 645 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm2139-201ENSMUST00000222569 1075 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC5.45□□□□□ -1.54
Col6a4A2AX52 AC129308.2-203ENSMUST00000224109 2385 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm3555-201ENSMUST00000160287 1395 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.45□□□□□ -1.54
Col6a4A2AX52 BC049739-201ENSMUST00000202626 660 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.45□□□□□ -1.54
Col6a4A2AX52 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col6a4A2AX52 Gm9110-201ENSMUST00000219035 617 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms