Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm43686-201ENSMUST00000197351 2439 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm37772-201ENSMUST00000191635 1394 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm23527-201ENSMUST00000104570 130 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm14879-201ENSMUST00000117308 507 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm14891-201ENSMUST00000117378 596 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Mir3060-201ENSMUST00000175339 83 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm25284-201ENSMUST00000180345 141 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm37946-201ENSMUST00000192064 347 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm7341-201ENSMUST00000192183 926 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm38079-201ENSMUST00000195603 154 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm44227-201ENSMUST00000203576 241 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm44472-201ENSMUST00000204922 943 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm6667-201ENSMUST00000217169 564 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm2089-201ENSMUST00000218294 479 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm3565-201ENSMUST00000222670 609 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 AC154250.1-201ENSMUST00000224775 489 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gm7984-201ENSMUST00000060640 538 ntBASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ube3bQ9ES34 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm37200-201ENSMUST00000193689 2172 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm36927-201ENSMUST00000192504 1841 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm7834-201ENSMUST00000117560 437 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm14755-201ENSMUST00000118037 384 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm9078-201ENSMUST00000119126 617 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm11517-201ENSMUST00000119491 387 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm11371-201ENSMUST00000120294 385 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Spanxn4-201ENSMUST00000172433 424 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm8221-201ENSMUST00000178052 564 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm8609-201ENSMUST00000182967 998 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm43505-201ENSMUST00000200579 139 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm19219-201ENSMUST00000215863 724 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm19936-201ENSMUST00000216414 838 ntBASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ube3bQ9ES34 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Ube3bQ9ES34 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ube3bQ9ES34 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ube3bQ9ES34 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.9□□□□□ -0.99
Ube3bQ9ES34 Gm18491-201ENSMUST00000192492 1594 ntBASIC8.9□□□□□ -0.99
Ube3bQ9ES34 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.9□□□□□ -0.99
Ube3bQ9ES34 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.9□□□□□ -0.99
Ube3bQ9ES34 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Ube3bQ9ES34 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.9□□□□□ -0.99
Ube3bQ9ES34 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ube3bQ9ES34 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ube3bQ9ES34 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms