Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm9504-201ENSMUST00000196322 468 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm43160-201ENSMUST00000196453 421 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm44538-201ENSMUST00000205615 348 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm23748-201ENSMUST00000104227 131 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm15149-201ENSMUST00000119370 360 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm7113-201ENSMUST00000120477 958 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm13357-201ENSMUST00000120528 537 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm22428-201ENSMUST00000158554 132 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Mir6244-201ENSMUST00000184156 117 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm27299-201ENSMUST00000184593 103 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm28443-201ENSMUST00000189081 698 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm37493-201ENSMUST00000193167 433 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm7463-201ENSMUST00000201541 547 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm43867-201ENSMUST00000203860 525 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm18586-201ENSMUST00000217265 518 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdc40Q9DC48 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.09□□□□□ -1.43
Cdc40Q9DC48 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Cdc40Q9DC48 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdc40Q9DC48 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Cdc40Q9DC48 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.09□□□□□ -1.44
Cdc40Q9DC48 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdc40Q9DC48 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm26079-201ENSMUST00000104066 133 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm12439-201ENSMUST00000117162 365 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm16016-201ENSMUST00000120831 550 ntBASIC6.08□□□□□ -1.44
Cdc40Q9DC48 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.08□□□□□ -1.44
Cdc40Q9DC48 Gm25435-201ENSMUST00000158277 267 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms