Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 AC160028.2-201ENSMUST00000218937 2519 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm8822-201ENSMUST00000118948 2347 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm22267-201ENSMUST00000104008 131 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Snord88a-201ENSMUST00000116723 90 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm12583-201ENSMUST00000120677 853 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm11341-201ENSMUST00000122316 447 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm23430-201ENSMUST00000122490 314 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm14747-201ENSMUST00000149888 984 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm24735-201ENSMUST00000158859 118 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm10177-201ENSMUST00000160052 444 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm27602-201ENSMUST00000183861 111 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm29509-201ENSMUST00000185716 321 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm3841-201ENSMUST00000191399 451 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm43459-201ENSMUST00000202093 331 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 AC155941.3-201ENSMUST00000218476 308 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 CT030184.2-201ENSMUST00000223064 263 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 AC134917.2-201ENSMUST00000223354 124 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Mir425-201ENSMUST00000083645 85 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm21122-201ENSMUST00000191548 3452 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Gm38322-201ENSMUST00000194074 2300 ntBASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Smc1aQ9CU62 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
Smc1aQ9CU62 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Smc1aQ9CU62 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm42513-201ENSMUST00000197831 2119 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm12439-201ENSMUST00000117162 365 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm11893-201ENSMUST00000117829 491 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm11553-201ENSMUST00000120682 240 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm19739-201ENSMUST00000195941 153 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Gm8607-201ENSMUST00000221864 431 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 AL671874.1-201ENSMUST00000223746 1123 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 AC161252.2-201ENSMUST00000224978 374 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Smc1aQ9CU62 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms