Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Gm24860-201ENSMUST00000158457 276 ntBASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Gm27679-201ENSMUST00000184612 84 ntBASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Gm37631-201ENSMUST00000192275 364 ntBASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Gm5306-201ENSMUST00000203325 757 ntBASIC6.31□□□□□ -1.4
Cdh23Q99PF4 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.31□□□□□ -1.4
Cdh23Q99PF4 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Trio-210ENSMUST00000227337 6375 ntBASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Gm45660-201ENSMUST00000210267 151 ntBASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdh23Q99PF4 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm15568-201ENSMUST00000118589 1213 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm11366-201ENSMUST00000119279 429 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm6931-201ENSMUST00000183103 371 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm37924-201ENSMUST00000195470 3647 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm17997-201ENSMUST00000211801 840 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Cdh23Q99PF4 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdh23Q99PF4 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Gm24886-201ENSMUST00000104384 123 ntBASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Gm22952-201ENSMUST00000116720 120 ntBASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.29□□□□□ -1.4
Cdh23Q99PF4 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Gm43516-201ENSMUST00000196891 322 ntBASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Gm44982-201ENSMUST00000208795 471 ntBASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdh23Q99PF4 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms