Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.83□□□□□ -1.32
Usp11Q99K46 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp11Q99K46 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp11Q99K46 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp11Q99K46 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Usp11Q99K46 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Usp11Q99K46 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Usp11Q99K46 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Usp11Q99K46 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm13983-201ENSMUST00000118018 865 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm12135-201ENSMUST00000119170 466 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm15149-201ENSMUST00000119370 360 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm12175-201ENSMUST00000122081 345 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp11Q99K46 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm3841-201ENSMUST00000191399 451 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm43928-201ENSMUST00000203737 409 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm17849-201ENSMUST00000219788 853 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Usp11Q99K46 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.82□□□□□ -1.32
Usp11Q99K46 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp11Q99K46 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Usp11Q99K46 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp11Q99K46 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp11Q99K46 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp11Q99K46 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp11Q99K46 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp11Q99K46 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp11Q99K46 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Usp11Q99K46 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp11Q99K46 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp11Q99K46 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.81□□□□□ -1.32
Usp11Q99K46 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm4992-201ENSMUST00000120256 768 ntBASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm14847-201ENSMUST00000121978 519 ntBASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.81□□□□□ -1.32
Usp11Q99K46 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp11Q99K46 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm9285-201ENSMUST00000177691 697 ntBASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm27152-201ENSMUST00000183828 99 ntBASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp11Q99K46 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.81□□□□□ -1.32
Usp11Q99K46 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm17895-201ENSMUST00000194028 874 ntBASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm7463-201ENSMUST00000201541 547 ntBASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.81□□□□□ -1.32
Usp11Q99K46 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp11Q99K46 Gm18781-201ENSMUST00000211252 924 ntBASIC6.81□□□□□ -1.32
Usp11Q99K46 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.81□□□□□ -1.32
Usp11Q99K46 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.81□□□□□ -1.32
Usp11Q99K46 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms