Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm26419-201ENSMUST00000104272 133 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm14904-201ENSMUST00000117067 335 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm11517-201ENSMUST00000119491 387 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Mir1929-201ENSMUST00000158635 93 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm3123-201ENSMUST00000163480 480 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm17217-201ENSMUST00000166613 469 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm27025-201ENSMUST00000182392 942 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Mir6241-201ENSMUST00000184225 103 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm29357-201ENSMUST00000186877 698 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm28507-201ENSMUST00000189737 703 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm37543-201ENSMUST00000192443 1031 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm37438-201ENSMUST00000192813 393 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm18752-201ENSMUST00000192876 608 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm45379-201ENSMUST00000211772 549 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 AC153801.1-201ENSMUST00000217904 947 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Olfr480-201ENSMUST00000071658 1029 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.5□□□□□ -1.37
Clrn1Q8K445 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Clrn1Q8K445 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm11581-201ENSMUST00000122024 763 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Clrn1Q8K445 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.49□□□□□ -1.37
Clrn1Q8K445 Gm23276-201ENSMUST00000157913 138 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC6.49□□□□□ -1.37
Clrn1Q8K445 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms