Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Mir678-201ENSMUST00000102114 84 ntBASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm12372-201ENSMUST00000121654 768 ntBASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm18447-201ENSMUST00000187501 307 ntBASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm37901-201ENSMUST00000195107 514 ntBASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 AC153899.1-201ENSMUST00000214092 1117 ntBASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Brf1Q8CFK2 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm25785-201ENSMUST00000104129 125 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm15216-201ENSMUST00000118058 277 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm15275-201ENSMUST00000154752 347 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm23259-201ENSMUST00000158318 303 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm3140-201ENSMUST00000163523 481 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm20454-201ENSMUST00000172713 221 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Mir3060-201ENSMUST00000175339 83 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm38030-201ENSMUST00000192376 475 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm5853-201ENSMUST00000197183 632 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm2225-201ENSMUST00000209570 377 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm2767-201ENSMUST00000209582 473 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Brf1Q8CFK2 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm25760-201ENSMUST00000103989 132 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm7350-201ENSMUST00000120964 636 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm5843-201ENSMUST00000121631 476 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm23116-201ENSMUST00000158481 67 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm23207-201ENSMUST00000158665 102 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm25026-201ENSMUST00000175017 188 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm23632-201ENSMUST00000175289 125 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm7804-202ENSMUST00000194187 854 ntBASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Brf1Q8CFK2 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms