Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Mir674-201ENSMUST00000102421 100 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm7091-201ENSMUST00000116438 586 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm11976-201ENSMUST00000119236 295 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm15149-201ENSMUST00000119370 360 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Defa-ps10-201ENSMUST00000121649 171 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm26486-201ENSMUST00000158021 110 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm9529-201ENSMUST00000177598 579 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm29141-201ENSMUST00000190357 882 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm5575-201ENSMUST00000190879 398 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm20926-201ENSMUST00000194457 696 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm42782-201ENSMUST00000197286 522 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm32899-201ENSMUST00000219694 207 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm17849-201ENSMUST00000219788 853 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm5321-201ENSMUST00000072050 447 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.61□□□□□ -1.35
Chmp2bQ8BJF9 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm22710-201ENSMUST00000116892 125 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm14904-201ENSMUST00000117067 335 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm7821-201ENSMUST00000117111 788 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm4997-201ENSMUST00000154056 360 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm25962-201ENSMUST00000157173 168 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm5456-201ENSMUST00000170706 844 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm17045-201ENSMUST00000178600 844 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm5711-201ENSMUST00000197896 421 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm17822-201ENSMUST00000204307 351 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm18838-201ENSMUST00000204855 886 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm44984-201ENSMUST00000207802 394 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm45279-201ENSMUST00000210315 391 ntBASIC6.6□□□□□ -1.35
Chmp2bQ8BJF9 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms