Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm5446-201ENSMUST00000091762 784 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm23527-201ENSMUST00000104570 130 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm13679-201ENSMUST00000118678 484 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm15149-201ENSMUST00000119370 360 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm15275-201ENSMUST00000154752 347 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm20615-201ENSMUST00000177503 705 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm27152-201ENSMUST00000183828 99 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm35323-201ENSMUST00000191836 499 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc40Q8BI79 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm23748-201ENSMUST00000104227 131 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm7113-201ENSMUST00000120477 958 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm23027-201ENSMUST00000158771 158 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm44112-201ENSMUST00000204787 372 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm9652-201ENSMUST00000209345 163 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.85□□□□□ -1.31
Ccdc40Q8BI79 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms