Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Mir678-201ENSMUST00000102114 84 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Gm11972-201ENSMUST00000118514 389 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Gm44382-201ENSMUST00000198683 122 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 AC166105.1-201ENSMUST00000227512 482 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 AC166574.7-201ENSMUST00000228502 704 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Gm2531-201ENSMUST00000075609 512 ntBASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Nup98Q6PFD9 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm44229-201ENSMUST00000203211 2487 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm14938-201ENSMUST00000119482 943 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm25782-201ENSMUST00000122526 289 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm24395-201ENSMUST00000158139 125 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm25065-201ENSMUST00000177914 132 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm25891-201ENSMUST00000180050 132 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm2287-202ENSMUST00000199619 1000 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 AC153357.1-201ENSMUST00000219190 482 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.51□□□□□ -1.21
Nup98Q6PFD9 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Nup98Q6PFD9 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm22714-201ENSMUST00000116894 78 ntBASIC7.5□□□□□ -1.21
Nup98Q6PFD9 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm5947-201ENSMUST00000179156 714 ntBASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm5645-201ENSMUST00000179597 714 ntBASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm37609-201ENSMUST00000191778 678 ntBASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm43222-201ENSMUST00000199013 603 ntBASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm19195-201ENSMUST00000222018 511 ntBASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm10095-201ENSMUST00000222765 483 ntBASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm24405-201ENSMUST00000083033 167 ntBASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 AC153152.1-201ENSMUST00000221105 2742 ntBASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nup98Q6PFD9 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms