Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ClpbQ60649 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
ClpbQ60649 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ClpbQ60649 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ClpbQ60649 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.37□□□□□ -1.39
ClpbQ60649 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ClpbQ60649 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ClpbQ60649 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ClpbQ60649 Gm13141-201ENSMUST00000117417 456 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm12653-201ENSMUST00000117778 561 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm11972-201ENSMUST00000118514 389 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm14863-201ENSMUST00000119648 307 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm5166-201ENSMUST00000121332 573 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm12778-201ENSMUST00000122341 333 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm12929-201ENSMUST00000122406 370 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm7613-201ENSMUST00000139070 487 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.37□□□□□ -1.39
ClpbQ60649 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.37□□□□□ -1.39
ClpbQ60649 Gm22764-201ENSMUST00000158370 92 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm25717-201ENSMUST00000158631 353 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm24176-201ENSMUST00000158928 121 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.37□□□□□ -1.39
ClpbQ60649 Gm8550-201ENSMUST00000161621 653 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.37□□□□□ -1.39
ClpbQ60649 Gm25574-201ENSMUST00000175245 249 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm28439-201ENSMUST00000187714 876 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Gm29036-201ENSMUST00000189967 877 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm37684-201ENSMUST00000192779 355 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.37□□□□□ -1.39
ClpbQ60649 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm43089-201ENSMUST00000199162 275 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm42824-201ENSMUST00000199361 247 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm18012-201ENSMUST00000204558 773 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm44251-201ENSMUST00000204963 442 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.37□□□□□ -1.39
ClpbQ60649 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.37□□□□□ -1.39
ClpbQ60649 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 AC154441.1-201ENSMUST00000223653 1006 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ClpbQ60649 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ClpbQ60649 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ClpbQ60649 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ClpbQ60649 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ClpbQ60649 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ClpbQ60649 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ClpbQ60649 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.37□□□□□ -1.39
ClpbQ60649 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.37□□□□□ -1.39
ClpbQ60649 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ClpbQ60649 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.36□□□□□ -1.39
ClpbQ60649 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
ClpbQ60649 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
ClpbQ60649 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
ClpbQ60649 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
ClpbQ60649 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
ClpbQ60649 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
ClpbQ60649 Snord88a-201ENSMUST00000116723 90 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm12573-201ENSMUST00000118158 286 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm11987-201ENSMUST00000118524 381 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm8534-201ENSMUST00000118553 766 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.36□□□□□ -1.39
ClpbQ60649 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.36□□□□□ -1.39
ClpbQ60649 Gm3585-201ENSMUST00000173438 875 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC6.36□□□□□ -1.39
ClpbQ60649 Gm27507-201ENSMUST00000184199 93 ntBASIC6.36□□□□□ -1.39
ClpbQ60649 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms