Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim41Q5NCC3 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim41Q5NCC3 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim41Q5NCC3 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim41Q5NCC3 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim41Q5NCC3 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm11322-201ENSMUST00000118095 435 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm5390-201ENSMUST00000119069 1230 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm23633-201ENSMUST00000175293 119 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm44538-201ENSMUST00000205615 348 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm45269-201ENSMUST00000210359 282 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm19709-201ENSMUST00000215403 482 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 AC192091.1-201ENSMUST00000218668 439 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 AC150661.1-201ENSMUST00000222563 495 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 AC126554.3-201ENSMUST00000223131 493 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 AC154283.1-201ENSMUST00000228417 389 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm22043-201ENSMUST00000082993 158 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm24522-201ENSMUST00000083964 108 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm43609-201ENSMUST00000199084 2712 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm35172-201ENSMUST00000196037 2649 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm10623-201ENSMUST00000209081 2639 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Gm42546-201ENSMUST00000201584 2592 ntBASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim41Q5NCC3 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm18830-201ENSMUST00000199036 1396 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm14869-201ENSMUST00000119007 884 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm7420-201ENSMUST00000162836 842 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Mir8094-201ENSMUST00000183361 117 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Mir6951-201ENSMUST00000183910 75 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm28700-201ENSMUST00000187614 579 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm20946-201ENSMUST00000212367 461 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trim41Q5NCC3 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Gm44423-201ENSMUST00000203746 3158 ntBASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Gm21754-201ENSMUST00000177550 479 ntBASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim41Q5NCC3 Gm29389-201ENSMUST00000191562 352 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms