Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm4997-201ENSMUST00000154056 360 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm22642-201ENSMUST00000175352 252 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Mir7212-201ENSMUST00000184098 61 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm42782-201ENSMUST00000197286 522 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm43928-201ENSMUST00000203737 409 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm8479-201ENSMUST00000203825 718 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm18838-201ENSMUST00000204855 886 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm22781-201ENSMUST00000104083 137 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm13983-201ENSMUST00000118018 865 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm12375-201ENSMUST00000119331 921 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm11925-201ENSMUST00000121375 535 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm9064-201ENSMUST00000163579 566 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm20432-201ENSMUST00000173716 250 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Mir7685-201ENSMUST00000183555 62 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28739-201ENSMUST00000185415 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28219-201ENSMUST00000185452 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28542-201ENSMUST00000185545 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28303-201ENSMUST00000185642 747 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29244-201ENSMUST00000185825 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29437-201ENSMUST00000185865 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29412-201ENSMUST00000185869 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28910-201ENSMUST00000185921 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28812-201ENSMUST00000185963 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29468-201ENSMUST00000185978 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28335-201ENSMUST00000186204 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28854-201ENSMUST00000186218 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28636-201ENSMUST00000186353 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28452-201ENSMUST00000186623 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29298-201ENSMUST00000186704 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28185-201ENSMUST00000186815 694 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28227-201ENSMUST00000186862 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28796-201ENSMUST00000186905 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29659-201ENSMUST00000187063 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28473-201ENSMUST00000187325 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28558-201ENSMUST00000187373 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28682-201ENSMUST00000187430 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28738-201ENSMUST00000187480 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28949-201ENSMUST00000187805 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28773-201ENSMUST00000187925 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29319-201ENSMUST00000188060 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29422-201ENSMUST00000188062 694 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28734-201ENSMUST00000188104 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm28787-201ENSMUST00000188357 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm9114-201ENSMUST00000188558 997 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29312-201ENSMUST00000188724 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29451-201ENSMUST00000188862 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29637-201ENSMUST00000188877 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29033-201ENSMUST00000189114 696 ntBASIC6.84□□□□□ -1.31
Trim43aQ3TL54 Gm29614-201ENSMUST00000189263 694 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms