Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
H3f3aP84244 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3f3aP84244 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.8□□□□□ -1.48
H3f3aP84244 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.8□□□□□ -1.48
H3f3aP84244 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
H3f3aP84244 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 AC132465.1-201ENSMUST00000219938 1307 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
H3f3aP84244 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
H3f3aP84244 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm22267-201ENSMUST00000104008 131 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm23979-201ENSMUST00000104071 128 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm13768-201ENSMUST00000116469 929 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm14513-201ENSMUST00000117403 123 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm11920-201ENSMUST00000118491 563 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm13455-201ENSMUST00000118767 517 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm5793-201ENSMUST00000119393 630 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm23259-201ENSMUST00000158318 303 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm23632-201ENSMUST00000175289 125 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm22642-201ENSMUST00000175352 252 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm27601-201ENSMUST00000184794 127 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm38030-201ENSMUST00000192376 475 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Ighv1-29-201ENSMUST00000194116 342 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm20926-201ENSMUST00000194457 696 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm44361-201ENSMUST00000197960 94 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.79□□□□□ -1.48
H3f3aP84244 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm30646-201ENSMUST00000207662 180 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm6290-201ENSMUST00000207666 1158 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm46364-201ENSMUST00000218548 319 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Gm8607-201ENSMUST00000221864 431 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 AC163667.1-201ENSMUST00000225201 1289 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
H3f3aP84244 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.79□□□□□ -1.48
H3f3aP84244 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
H3f3aP84244 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.79□□□□□ -1.48
H3f3aP84244 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
H3f3aP84244 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.79□□□□□ -1.48
H3f3aP84244 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3f3aP84244 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC5.78□□□□□ -1.48
H3f3aP84244 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3f3aP84244 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3f3aP84244 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3f3aP84244 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms