Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CiitaP79621 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Gm24069-201ENSMUST00000104512 127 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
CiitaP79621 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
CiitaP79621 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Gm15048-201ENSMUST00000118201 954 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Gm12518-201ENSMUST00000122075 779 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Gm11341-201ENSMUST00000122316 447 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Gm26023-201ENSMUST00000122722 313 ntBASIC7.12□□□□□ -1.27
CiitaP79621 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.12□□□□□ -1.27
CiitaP79621 Gm15275-201ENSMUST00000154752 347 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Gm26162-201ENSMUST00000157793 132 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Gm26557-201ENSMUST00000180756 493 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Mir6989-201ENSMUST00000184812 65 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Gm8506-201ENSMUST00000186661 829 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Gm29160-201ENSMUST00000190094 699 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Gm37135-201ENSMUST00000192652 534 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Gm5853-201ENSMUST00000197183 632 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Gm43762-201ENSMUST00000201521 295 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.12□□□□□ -1.27
CiitaP79621 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.12□□□□□ -1.27
CiitaP79621 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.12□□□□□ -1.27
CiitaP79621 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.12□□□□□ -1.27
CiitaP79621 AC107757.1-201ENSMUST00000226780 357 ntBASIC7.12□□□□□ -1.27
CiitaP79621 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CiitaP79621 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CiitaP79621 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CiitaP79621 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
CiitaP79621 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.12□□□□□ -1.27
CiitaP79621 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CiitaP79621 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.11□□□□□ -1.27
CiitaP79621 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CiitaP79621 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CiitaP79621 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CiitaP79621 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 Gm44723-201ENSMUST00000207369 4000 ntBASIC7.11□□□□□ -1.27
CiitaP79621 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CiitaP79621 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Gm6977-201ENSMUST00000121568 512 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Gm23884-201ENSMUST00000122687 294 ntBASIC7.11□□□□□ -1.27
CiitaP79621 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CiitaP79621 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.11□□□□□ -1.27
CiitaP79621 Gm26037-201ENSMUST00000158150 311 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CiitaP79621 Gm28186-201ENSMUST00000187447 679 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Gm28443-201ENSMUST00000189081 698 ntBASIC7.11□□□□□ -1.27
CiitaP79621 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
CiitaP79621 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms