Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Msh6P54276 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Msh6P54276 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Msh6P54276 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Msh6P54276 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Msh6P54276 Gm11318-201ENSMUST00000118640 961 ntBASIC8.28□□□□□ -1.08
Msh6P54276 Gm13489-201ENSMUST00000121234 971 ntBASIC8.28□□□□□ -1.08
Msh6P54276 Gm22210-201ENSMUST00000158101 144 ntBASIC8.28□□□□□ -1.08
Msh6P54276 Gm23343-201ENSMUST00000158964 143 ntBASIC8.28□□□□□ -1.08
Msh6P54276 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC8.28□□□□□ -1.08
Msh6P54276 Gm37376-201ENSMUST00000192176 453 ntBASIC8.28□□□□□ -1.08
Msh6P54276 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC8.28□□□□□ -1.08
Msh6P54276 Gm5853-201ENSMUST00000197183 632 ntBASIC8.28□□□□□ -1.08
Msh6P54276 Gm3321-201ENSMUST00000200603 1129 ntBASIC8.28□□□□□ -1.08
Msh6P54276 Gm45185-201ENSMUST00000207556 404 ntBASIC8.28□□□□□ -1.08
Msh6P54276 AC154634.2-201ENSMUST00000225983 1184 ntBASIC8.28□□□□□ -1.08
Msh6P54276 AC165106.1-201ENSMUST00000227580 408 ntBASIC8.28□□□□□ -1.08
Msh6P54276 AC116591.1-201ENSMUST00000227919 351 ntBASIC8.28□□□□□ -1.08
Msh6P54276 AC154616.2-201ENSMUST00000227978 398 ntBASIC8.28□□□□□ -1.08
Msh6P54276 AC154563.1-201ENSMUST00000228317 442 ntBASIC8.28□□□□□ -1.08
Msh6P54276 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC8.28□□□□□ -1.08
Msh6P54276 AC158388.2-201ENSMUST00000223665 1314 ntBASIC8.28□□□□□ -1.08
Msh6P54276 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Msh6P54276 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Msh6P54276 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Msh6P54276 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Msh6P54276 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Msh6P54276 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Msh6P54276 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Msh6P54276 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
Msh6P54276 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Msh6P54276 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Msh6P54276 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.27□□□□□ -1.08
Msh6P54276 AC130217.2-201ENSMUST00000224009 2990 ntBASIC8.27□□□□□ -1.08
Msh6P54276 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
Msh6P54276 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Msh6P54276 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Msh6P54276 Gm18796-201ENSMUST00000190440 1767 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Msh6P54276 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Msh6P54276 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Msh6P54276 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Msh6P54276 Gm25795-201ENSMUST00000104421 132 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Msh6P54276 Gm4911-201ENSMUST00000119388 945 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Gm15959-201ENSMUST00000121724 368 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC8.27□□□□□ -1.09
Msh6P54276 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC8.27□□□□□ -1.09
Msh6P54276 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC8.27□□□□□ -1.09
Msh6P54276 Gm24719-201ENSMUST00000157520 110 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Gm23539-201ENSMUST00000157537 224 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Gm24733-201ENSMUST00000158863 253 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Msh6P54276 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Msh6P54276 Mir3097-201ENSMUST00000175356 67 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Gm23011-202ENSMUST00000197855 275 ntBASIC8.27□□□□□ -1.09
Msh6P54276 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Msh6P54276 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC8.27□□□□□ -1.09
Msh6P54276 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC8.27□□□□□ -1.09
Msh6P54276 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC8.27□□□□□ -1.09
Msh6P54276 Gm25515-201ENSMUST00000083858 157 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Msh6P54276 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Msh6P54276 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Msh6P54276 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.27□□□□□ -1.09
Msh6P54276 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Msh6P54276 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Msh6P54276 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Msh6P54276 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Msh6P54276 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.27□□□□□ -1.09
Msh6P54276 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Msh6P54276 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Msh6P54276 Gm38124-201ENSMUST00000191710 2581 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Msh6P54276 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.26□□□□□ -1.09
Msh6P54276 Gm44417-201ENSMUST00000203298 3359 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Gm37234-201ENSMUST00000193259 1441 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Msh6P54276 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Msh6P54276 Gm23440-201ENSMUST00000104299 130 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Gm11198-201ENSMUST00000119771 974 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Gm5401-201ENSMUST00000122444 365 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Gm23030-201ENSMUST00000158004 273 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Gm22548-201ENSMUST00000174899 78 ntBASIC8.26□□□□□ -1.09
Msh6P54276 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Msh6P54276 Gm37187-201ENSMUST00000193425 341 ntBASIC8.26□□□□□ -1.09
Msh6P54276 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Gm44312-201ENSMUST00000203536 469 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Gm18839-201ENSMUST00000204292 670 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC8.26□□□□□ -1.09
Msh6P54276 Gm45514-201ENSMUST00000211531 689 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC8.26□□□□□ -1.09
Msh6P54276 Gm4510-201ENSMUST00000218265 427 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Snora44-201ENSMUST00000082670 129 ntBASIC8.26□□□□□ -1.09
Msh6P54276 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Msh6P54276 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Msh6P54276 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms